General
Preferred name
UNC1999
Synonyms
UNC 1999 ()
UNC-1999 ()
P&D ID
PD000019
CAS
1431612-23-5
Tags
available
probe
drug candidate
Drug indication
Discovery agent
Probe info
Probe type
calculated probe
experimental probe
P&D approved
Probe selectivity
protein-selective
Probe sources
Chemical Probes.org
High-quality chemical probes
Protein methyltransferases chemical toolbox
SGC Probes
Tool Compound Set
Probe targets
[[ compound.targets[t].gene_name ]]
Probe control
Orthogonal probes
10
No orthogonal probes found
Similar probes
3
No structurally similar probes found
Structure formats
[[ format ]]
[[ compound[format === 'MOL' ? 'molblock' : format.toLowerCase()] ]]
Description
(extracted from source data)
COMMENT
Three days are required for reduction of H3K27me3 in MCF10a cells with IC50 ~135 nM. I recommend using UNC1999 in parallel with its control, UNC2400, and the orthogonal probe, GSK343. Jun 16 2016 - 5:53pm; This probe is a dual inhibitor of EZH1 and EZH2 methyltransferase enzymes (in vitro IC50s are 45 nM and 4.6 nM, respectively), which are the components of Polycomb repressive complex 2. This complex converts dimethylated lysines into trimethylated lysines in H3K27. Trimethylation of K27 is a transcriptionally repressive epigenetic mark. The probe inhibits H3K27 trimethylation in MCF10A cells at 5 uM after 3 days treatment, shows toxicity after 7 days of treatment. Potential off-target effects could be due to the GPCR binding with Ki 4,700 nM; 65 nM; 300 nM; and 1,500 nM for Sigma1, Sigma 2, Histamine H3, and Norephedrine transporter, respectively. In vivo studies have shown that the probe has good PK properties; however, its inhibitory effect on EZH1 and EZH2 in different tissues has not been examined, and its organ and tissue distribution profiles were not reported. Therefore, if this probe is used for in vivo studies, careful investigation of its tissue and organ distribution are needed, as well as an analysis of its inhibitory effect of EZH1/2 and off-target GPCR receptors. I recommend using this probe along with UNC2400, which is a negative control molecule. Jun 30 2016 - 4:41am; UNC1999 has utility in cell-based experiments when used in conjunction with UNC2400. Aug 29 2016 - 11:24pm; A concentration lower than 1 µM. The cellular IC50 for reduction of H3K27me3 levels is 124 nM. I would suggest 2-3x IC50 to avoid off-targets (e.g., GPCRs) at micromolar concentrations. Suggested to use UNC2400 as a control compound in parallel. A wider panel of off-targets (e.g., CEREP) would be required prior to in vivo use of this probe. Apr 19 2021 - 11:59am
MOA
Protein substrate noncompetitive inhibitor;SAM competitive inhibitor
DESCRIPTION
UNC1999 is a cell-permeable chemical probe for histone H3-lysine 27 (H3K27) methyltransferase EZH2 activity, developed by the Structural Genomics Consortium (SGC) in collaboration with the Center for Integrative Chemical Biology and Drug Discovery (CICBDD) at the University of North Carolina .
Click here to link to the SGC's full list of epigenetics probes. (GtoPdb)
Click here to link to the SGC's full list of epigenetics probes. (GtoPdb)
DESCRIPTION
UNC1999 is a SAM-competitive, potent and selective inhibitor of EZH2/1 with IC50s of <10 nM and 45 nM, repectively.
PRICE
106
MOA
Inhibitor
(Chemical Probes.org)
DESCRIPTION
Potent and selective EZH2/EZH1 inhibitor
(Tocriscreen Plus)
DESCRIPTION
Negative control of UNC 1999 (Cat. No. 4904)
(Tocris Bioactive Compound Library)
DESCRIPTION
UNC1999 is a orally bioavailable, effective and specific inhibitor of EZH2 (IC50=2 nM) and EZH1 (IC50=45).
(TargetMol Bioactive Compound Library)
[[ p.pathway_name ]]
[[ compound.targets[tid].gene_name ]]
Cell lines
7
Organisms
0
Compound Sets
21
AdooQ Bioactive Compound Library
Cayman Chemical Bioactives
Chemical Probes.org
CZ-OPENSCREEN Bioactive Library
Drug Repurposing Hub
DrugMAP
EU-OPENSCREEN Bioactive Compound Library
EUbOPEN Chemogenomics Library
Guide to Pharmacology
High-quality chemical probes
JUMP-Target 1 Compound Set
Mcule NIBR MoA Box Subset
MedChem Express Bioactive Compound Library
Novartis Chemogenetic Library (NIBR MoA Box)
Protein methyltransferases chemical toolbox
Selleckchem Bioactive Compound Library
SGC Probes
TargetMol Bioactive Compound Library
Tocris Bioactive Compound Library
Tocriscreen Plus
Tool Compound Set
[[ a.name ]]
[[ ligand_id ]]
free of charge
External IDs
14
Molecular Weight
569.35
Hydrogen Bond Acceptors
7
Hydrogen Bond Donors
2
Rotatable Bonds
9
Ring Count
5
Aromatic Ring Count
4
cLogP
5.09
TPSA
99.15
Fraction CSP3
0.45
Chiral centers
0.0
Largest ring
6.0
QED
0.29
Structural alerts
0
No structural alerts detected
Custom attributes
(extracted from source data)
Target
Histone-lysine N-methyltransferase EZH1
Histone-lysine N-methyltransferase EZH2
EZH1, EZH2
Histone methyltransferase
Apoptosis related,Autophagy,EZH1/2,Histone Methyltransferase
EZH2, EZH1
EZH1
Target Type
Enzymes
Primary Target
EZH2
MOA
Inhibitor
EZH2 inhibitor
histone lysine methyltransferase inhibitor
Member status
member
Pathway
Autophagy
Chromatin/Epigenetic
Target subclass
Protein methyltransferase
Protein methyltransferase, Protein methyltransferase
Target class
Epigenetics
Epigenetic, Epigenetic
Orthogonal probe
GSK343
Protein Family
Histone Methyltransferase
Control
UNC2400
Recommended Cell Concentration
1 uM
Source data

